Live
PPI Benchmark Studio
Check protein–protein interaction datasets for bias before training
A web application that evaluates protein–protein interaction datasets before machine-learning training, detecting biases and shortcuts that could lead to misleading predictions unrelated to actual biology.
Related publications
- Under reviewPreprint
Protein-novelty, sequence-similarity, and negative-sampling controls reveal benchmark-specific discrimination in protein–protein interaction prediction
Citation: Protein-novelty, sequence-similarity, and negative-sampling controls reveal benchmark-specific discrimination in protein–protein interaction prediction. (2026).